1 setup

Run this daily to get a snapshot of tag stats and health

2 notes

It looks like ZcTag130_DUML recently pushed a message that was corrupt but managed to still be decoded as some sort of series data but with all the wrong times. I think it is possible the decoder will catch the mistake, otherwise, we’ll have to filter it out manually.

2.1 PATH TO LATEST DATA

# paths to update when you run
portaldir <- "portal_downloads"
datadirss <- list.files(portaldir)
datadir <- file.path(portaldir, datadirss[length(datadirss)])

2.2 basic helper function

2.3 load paths adjust as needed

2.4 Import data from wildlife portal and the goniometer. Merge the two stacks.

3 tag summary

ptt hex serial tag_model deployid catalog_ID_DUML BRS_season deploydate_yyyymmdd deploytime_hhmm species location tagger permit tagtype longitude latitude tagside taglocation taglocationnotes programming_basic_descriptor notes recorder age sex agesex_conf headshot agesex_reason appearance_notes
233109 406B15F 22A0220 SPLASH10-F-333 ZcTag128_DUML BRS9_2021 20220621 1928 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.74860 35.65602 right below_dorsal NA Zca_BRS_series_fastloc wrc a f High 0 calf present NA
201587 1002835 19A0914 SPLASH10-333 ZcTag129_DUML Zca_Rakes_027_HAT BRS9_2021 20220621 2056 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.75484 35.64619 left dorsal NA Zca_BRS_series 26 days wrc a m High 1 erupted teeth NA
201588 100284C 19A0916 SPLASH10-333 Zctag130_DUML BRS9_2021 20220630 1413 Zca Hatteras DLW Nowacek 22156 SPLASH10 -74.72370 35.64610 right dorsal NA Zca_BRS_series 26 days wrc a f High 0 calf present NA

4 calculate stats

5 summaries

5.1 status and corrupt

deployid ptt nmsg ncrc transmits battvoltrange zerodepthrange last_sta_recieved ncorrupt
3 ZcTag128_DUML 233109 1 1 796 3.504 to 3.504 3 to 3 2022-06-23 09:40:16 65
1 ZcTag129_DUML 201587 57 55 14305 3.504 to 3.568 -74 to 172 2022-07-31 13:43:06 162
2 ZcTag130_DUML 201588 72 70 12386 3.44 to 3.568 0 to 3 2022-08-01 01:10:32 218

5.2 locations

deployid ptt nloc nz na nb n0 n1 n2 n3 last_loc_recieved
3 ZcTag128_DUML 233109 48 0 7 27 6 2 0 0 2022-06-29 23:07:29
1 ZcTag129_DUML 201587 538 1 78 163 182 80 28 6 2022-08-01 03:23:23
2 ZcTag130_DUML 201588 451 2 42 105 194 83 21 4 2022-08-01 02:49:43

5.3 behavior

deployid ptt n_beh_msgs totalbeh_time_hours nbehgaps behgap_time_hours latest_beh_recieved
3 ZcTag128_DUML 233109 0 0 0 0
1 ZcTag129_DUML 201587 0 0 0 0
2 ZcTag130_DUML 201588 0 0 0 0

5.4 series

this doesn’t count the messages quite right for some reason, but you get the idea. you can scroll down below and see the plot of messages receieved.

deployid ptt n_ser_msgs totalser_time_hours nsergaps sergap_time_hours nsermsggaps latest_ser_recieved
3 ZcTag128_DUML 233109 20 80 11 112 28 2022-06-29 16:00:00
1 ZcTag129_DUML 201587 151 604 0 0 0 2022-07-17
2 ZcTag130_DUML 201588 116 464 1 4 1 2022-07-20

5.5 fastloc

deployid ptt fastloc_received fastloc_locnum fastloc_failures fastloc_latest
ZcTag129_DUML 201587 0 0 0 0
ZcTag130_DUML 201588 0 0 0 0
ZcTag128_DUML 233109 7 14 83 29-Jun-2022 15:41:50

6 position snapshot

Plot of the last four positions for all the tags which have generated an argos position within the last 3 days

7 plot pressure sensors

PROVISIONAL plot status cutoffs and bat voltage. Cutoffs are in dotted red lines. These are either:

  1. healthy tags: the last status messages as a conservative cutoff and on tags that are still actively transmitting this is likely to increase
  2. unhealthy pressure transducer tags: if there are 2 status messages (crc’d) where the | zerodepth | > 10 then this is the last good status message before the 1st of those two bad messages.

We have settled on a more complicated cutoff system to capture a little more very likely good data. For detail please see DATAPREP_sattag_processing. But this gives you a general idea of approx. cutoffs and pressure transducer health.

8 ship based cees

8.1 +/- 12 hour look at ship based cee XXXXXXX

gonio hits in purple

8.2 +/- 12 hour look at ship based cee XXXXXXX

gonio hits in purple

9 series message source plots

10 series series

10.1 ZcTag128_DUML || 233109

10.2 ZcTag129_DUML || 201587

10.3 Zctag130_DUML || 201588

11 corrupt versus total messages {DISABLED}